CDS

Accession Number TCMCG051C48998
gbkey CDS
Protein Id XP_024447161.1
Location complement(join(10167969..10168012,10168382..10168664,10170376..10170412,10171390..10171528,10172211..10172343,10172561..10172743))
Gene LOC18108408
GeneID 18108408
Organism Populus trichocarpa

Protein

Length 272aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024591393.1
Definition RNA-binding protein 38 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000075        [VIEW IN EMBL-EBI]
GO:0000077        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003730        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006977        [VIEW IN EMBL-EBI]
GO:0006978        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007050        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008285        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009895        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030330        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031330        [VIEW IN EMBL-EBI]
GO:0031570        [VIEW IN EMBL-EBI]
GO:0031571        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042770        [VIEW IN EMBL-EBI]
GO:0042772        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043487        [VIEW IN EMBL-EBI]
GO:0043488        [VIEW IN EMBL-EBI]
GO:0043489        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044773        [VIEW IN EMBL-EBI]
GO:0044774        [VIEW IN EMBL-EBI]
GO:0044783        [VIEW IN EMBL-EBI]
GO:0044819        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048255        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070935        [VIEW IN EMBL-EBI]
GO:0071156        [VIEW IN EMBL-EBI]
GO:0071158        [VIEW IN EMBL-EBI]
GO:0072331        [VIEW IN EMBL-EBI]
GO:0072395        [VIEW IN EMBL-EBI]
GO:0072401        [VIEW IN EMBL-EBI]
GO:0072413        [VIEW IN EMBL-EBI]
GO:0072422        [VIEW IN EMBL-EBI]
GO:0072431        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090068        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901988        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1901991        [VIEW IN EMBL-EBI]
GO:1902369        [VIEW IN EMBL-EBI]
GO:1902373        [VIEW IN EMBL-EBI]
GO:1902400        [VIEW IN EMBL-EBI]
GO:1902402        [VIEW IN EMBL-EBI]
GO:1902403        [VIEW IN EMBL-EBI]
GO:1902806        [VIEW IN EMBL-EBI]
GO:1902807        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]
GO:2000045        [VIEW IN EMBL-EBI]
GO:2000134        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACTCCAGCAAATTTGGCAGGTCAGTTTGGTGACACAACTTATACTAAGGTATTTGTTGGAGGGTTGGCTTGGGAAACTCAAAAGGAGACCATGAAGAAATACTTTGAGCAGTTTGGTGAGATCTTGGAAGCTGTTGTCATCACTGATAAGGCCACTGGCAGATCCAAAGGCTATGGATTTGTAACTTTTCGAGAACCTGATGCTGCCATGAGGGCTTGTGTGGATGCTGCTCCAGTGATAGATGGAAGAAGAGCTAATTGTAATCTTGCATCTATGGGTGTTCAGAGATCCAAACCCTCTACCCCAAAGCATGCAGGAGGAGCAGGGAGGAACTTTAGGGTAATGAGCTCTTTTCAGACAGGGTTTGGAGGTGGTGTGGGCACAGCTTTTCCTCCAGCTGCATCCTTCCCTCATTATGCCATCCAACAAGGGATGCCCTATAATGTCTATGGGTACTCTTCATACTCGCCAGACTACACATACCCAACGAGCTACTACAATGTGTATGGAGGGGCAACTGCACAGTATCCCATGTATGGAACTGGGCATGGTGGGCTGATGAATGGTTCAGCTGCAGCCTTTTACCCGTATCTACAATTTGGAGAAGGAAGTGGAGGAGCCGCCACCAGCTACCCTACTTCCGGGCAGAGCTATGGTGTCCAGTACCCATACAACCTGTTCCAGTATTCAGCCATTAATTCAACCACCGGAGGATATCCACAGCATTATGGTGCACCTATGTCTCTTGCTCCCACTGCGGCCTTGCCATCAGGCGTGACCTTGGCTCTTCAAGCTCCACCAATTCCTCATCGCTAG
Protein:  
MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLASMGVQRSKPSTPKHAGGAGRNFRVMSSFQTGFGGGVGTAFPPAASFPHYAIQQGMPYNVYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGHGGLMNGSAAAFYPYLQFGEGSGGAATSYPTSGQSYGVQYPYNLFQYSAINSTTGGYPQHYGAPMSLAPTAALPSGVTLALQAPPIPHR